Unfortunately you won't be able to use User Groups to filter out Computer based policies, they only apply to the workstations (or in this case, the server) no matter who logs into it. In fact, only having users in your security group may negate the GPO all together (if you removed the "Authenticated Users" group) since the server isn't part of the group and can't get the policy applied to it. If you added the server to the group, the GPO would then apply, but as I mentioned, it would apply to everyone logging into it.
Oh, something else I just realized, I don't believe that option works on 2000 Servers, only in 2003.


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